mKw RopSeg

Napari plugin for ROP data copying and segmentation assistance.

Provides tools for:

• Copying scan data based on a study parquet file.
• Loading local scan data into Napari.
• Basic segmentation tools (add layer, brush size, paint/erase).
• ROI-based Otsu thresholding.
• Full-view edge detection labeling.

Installation¶

For development, install in editable mode:

cd Mani_Tools_plugins/mKw-RopCop
pip install -e .

Or install using the provided script:

python Mani_Tools_plugins/mKw-RopCop/install_dev.py

Usage¶

Launch Napari. The "mKw RopCop" widget should appear in the Plugins menu.

Alternatively, launch with the helper script:

python Mani_Tools_plugins/mKw-RopCop/launch_ropcop.py